decimer-data-mini / README.md
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basic details
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metadata
license: openrail
pretty_name: PubChem 68K
size_categories:
  - 10K<n<100K
task_categories:
  - image-to-text

Molecules in this set

  • have a molecular weight of fewer than 1500 Daltons,
  • not possess counter ions,
  • only contain the elements C, H, O, N, P, S, F, Cl, Br, I, Se and B,
  • not contain isotopes of Hydrogens (D, T),
  • have 3–40 bonds,
  • not contain any charged groups including zwitterionic forms,
  • only contain implicit hydrogens, except in functional groups,
  • have less than 40 SMILES characters,
  • no stereochemistry is allowed.

The original dataset from Decimer was imported and randomly sampled. 516x516 sized images were generated using RDKit.

Reference

Rajan, Kohulan; Zielesny, Achim; Steinbeck, Christoph (2021): DECIMER 1.0: Deep Learning for Chemical Image Recognition using Transformers. ChemRxiv. Preprint. https://doi.org/10.26434/chemrxiv.14479287.v1