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  ---
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- configs:
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- - config_name: default
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- data_files:
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- - split: train
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- path: "sequence.csv"
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- license: mit
 
 
 
 
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  task_categories:
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- - text-generation
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  size_categories:
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- - 1K<n<10K
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  ---
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+ pretty_name: "Latent DNA Diffusion Sequences (hg19)"
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+ tags:
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+ - genomics
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+ - biology
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+ - generative-ai
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+ - diffusion-models
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+ - dna
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+ - huggingscience
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+ - science
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+ license: "other"
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  task_categories:
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+ - text-generation # Generating DNA sequences is analogous to text generation
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  size_categories:
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+ - 10M<n<100M
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+ ---
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+
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+ # Dataset Card for Latent DNA Diffusion
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+
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+ ## Dataset Description
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+
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+ This dataset contains a collection of human DNA sequences, processed for the purpose of training generative models like the one described in the **Latent DNA Diffusion** project.
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+
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+ - **Source**: Human reference genome assembly **hg19 (GRCh37)**
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+ - **Sequence length**: 256 base pairs
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+ - **Format**: HDF5 file containing uniformly processed sequences
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+
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+ The primary purpose of this dataset is to serve as a training corpus for models that can learn the underlying patterns of the human genome and generate novel, realistic DNA sequences.
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+
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+ ### Applications
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+ - Data augmentation for genomics
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+ - Studying gene regulation
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+ - Generating synthetic genomic data to preserve patient privacy
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+
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+ ---
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+
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+ ## How to Use
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+
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+ The data is stored in a single **HDF5** file.
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+
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+ Example usage in Python:
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+
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+ ```python
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+ import h5py
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+ from huggingface_hub import hf_hub_download
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+
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+ # Download the HDF5 file from Hugging Face Hub
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+ file_path = hf_hub_download(
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+ repo_id="Zehui127127/latent-dna-diffusion",
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+ filename="human_hg19_256.hdf5",
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+ repo_type="dataset"
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+ )
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+
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+ # Open and explore the file
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+ with h5py.File(file_path, 'r') as f:
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+ print("Available keys:", list(f.keys()))
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+ sequences = f['sequences'][:] # Example key
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+ print("Shape of dataset:", sequences.shape)